varvis® SARS-CoV-2 service

The cloud-based software service for automated high-throughput SARS-CoV-2 genome sequencing.

National SARS-CoV-2 surveillance programs require cost-efficient execution of high-throughput virus genome sequencing. The varvis® SARS-CoV-2 service minimizes the need for manual interaction and produces reports suitable for national agencies.

Key Benefits

Reduce manual work to a minimum

Leverage a managed cloud service at low costs

Benefit from workflows that support national reporting

The varvis® SARS-CoV-2 service Includes

varvis® SARS-CoV-2 service - Automation and Surveillance


 Automated upload directly from the sequencing instrument

 Supports hybrid capture and amplicon-based assays

 No manual interaction until review of results


 Automated export of all samples into a single FASTA file

 Export QC approved samples only

 Virus lineage report based on current data for the entire batch

  Quality control

 Review QC data of entire batches at a glance

 Configure assay-specific quality thresholds

 Accept or reject samples based on QC

Coming soon: Integration with the German surveillance program API for further automation

varvis® SARS-CoV-2 - Quality Control